Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889371.1_cds_XP_016444053.1_39155
CDS Infomation

[gene=LOC107769356] [db_xref=GeneID:107769356] [protein=pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like] [protein_id=XP_016444053.1] [location=complement(join(3600..4709,5647..6003))] [gbkey=CDS]
Sequence

ATGACCCTGCCATTTTCTTGTTCCGGGTCGGTTCAATTTCCCTGCTCAACTACTACTACA
CCAACATTTCAACAACCCAAACTGACCCACAATCCATGGCTAAATTTCACTTACAAGAGA
CCCGTTTTCTATGTTATCCGTTGTGTGTCGACCCGACCCGGGAGAAAGTCGGGTACCATG
AGCCGCATCGGGTCATCCGAGGCACAGGAGCTGGTGACTTTGCTGATGAAGAATTTCAGT
GATAAGAAGCCATTAGTGAGCACTCTGAACAAGTACGTTAAGTTTGTGAGGACTGAACAC
TGTTTCTTGCTCTTTGAAGAACTTGGCAAAACTGATAATTGGCTTCAATGCCTTGAGGTT
TTCAGATGGATGCAAAAACAACGGTGGTATATAGCGGATAATGGGGTTTACTCAAAGTTG
ATATCAGTAATGGGGAAGAAAGGGCAGATCAGAATGGCAATGTGGCTGTTCTCCGAGATG
CGTAATAGTGGGTGTCGGCCAGATACCTCAGTGTACAATGCAGTCATTTCAGCCCATCTC
CACTCCCGAGACAAATCCAAGGCCTTGGCAAAGGCTATGGGTTACTTTGAGAAGATGAAG
GGAATGGAGCGTTGTAGTCCAAGTATTGTTACTTACAACATTCTATTGAGAGCTTTTGCT
CAGGCAAAAAATGTTGAACAGGTAGATGCTCTGTTGAAAGATCTCGAGGATAGCATTGTC
ACTCCTGATATATTCACATTTAATGGTCTGATGGATGCCTATGGGAAAAATGGGATGATC
AAGGAAATGGAGCATGTTCTCTCTCGAATAAAGAGTAATGAGCTGAAACCAGATATCATT
ACTTTTAACATATTGATTGATTCATATGGGAAGAAGCAGGAATTTCAGAAGATGGAACAA
GTTTTTAAAAGCTTGCTTCGATCCAAGGAAAAACCTACCATTCCCACGTTTAACTCAATG
ATAACAAACTATGGAAAAGCACGGCTGAGAGAGAAAGCAGAGTTAGTTCTTGAGAAGATG
ACTGACTTAGGATATAGGCCAAGTTACATCACATATGAGTGCCTCCTTATGATGTATGGG
CATTGCGACTGTGTTGCAAAAGCAAGAGAACTATTTGATAGGGTGGTAGAATCTGAAAAG
GAGAAGAAGGTTTCAACACTGAATTCAATGCTTGATACTTATTGCATGAATGGTTTACCC
GTAGAAGCCGACGCGCTCTTTGAGAGTATTCATTCAGCCAAAGCTTTCCCTATAGATTCC
TCAACCTATAAACTTCTATATAAGGCCTACACTAAAGCCGATATGAAGGAGCTAGTACAA
AAATTGTTGACATGTATGGACAAAGATGGGATTATCCCCAACAAAAAGTTCTTTCTTGAT
GCCTTGGGGGCCTTTGGGACTGGACCTATGAGCCAAAAGGCAGCTGGTGATAATAAAGGA
TTGAACAAGCAGAGGGGCCGTAAGTGA

Peptide Sequence

PEP ID

XP_016444053.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic-like [Nicotiana tabacum]
Sequence

MTLPFSCSGSVQFPCSTTTTPTFQQPKLTHNPWLNFTYKRPVFYVIRCVSTRPGRKSGTM
SRIGSSEAQELVTLLMKNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGKTDNWLQCLEV
FRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNAVISAHL
HSRDKSKALAKAMGYFEKMKGMERCSPSIVTYNILLRAFAQAKNVEQVDALLKDLEDSIV
TPDIFTFNGLMDAYGKNGMIKEMEHVLSRIKSNELKPDIITFNILIDSYGKKQEFQKMEQ
VFKSLLRSKEKPTIPTFNSMITNYGKARLREKAELVLEKMTDLGYRPSYITYECLLMMYG
HCDCVAKARELFDRVVESEKEKKVSTLNSMLDTYCMNGLPVEADALFESIHSAKAFPIDS
STYKLLYKAYTKADMKELVQKLLTCMDKDGIIPNKKFFLDALGAFGTGPMSQKAAGDNKG
LNKQRGRK

Transcript Sequence

Gene sequence data has not been registered.